‘High Throughput Sequencing’ Can be Standardized: FDA Research
Results of a study led by FDA scientists suggest that a new technology known as high throughput sequencing (HTS) could be standardized and used for rapid screening of biologic products, including vaccines, to demonstrate absence of contamination. The technology reportedly enables scientists to sequence hundreds of millions of DNA molecules at a time.
An agency statement says the study results support development of standard reference virus reagents that can be used to validate the performance of their HTS procedures to demonstrate absence of viral contamination for product safety.
“To determine if HTS could producer reliably similar screening results in difference laboratories, scientists at FDA and in two other industry laboratories each independently used the technique to determine how well it could detect four model viruses…. The viruses were spiked into a human cell line called HeLa, using disrupted whole cell material or RNA extracted from the cells to represent potential types of samples that are tested for adventitious viruses in biologics (microorganisms that may have been unintentionally introduced into the manufacturing process of a biological medicinal product),” FDA says. “The results showed that regardless of the commercial gene analysis device used or the preparation techniques used to perform the screening processes, the results were comparable among the laboratories. That is, the laboratories identified about the same amount of each virus in the samples regardless of the differences in sample preparation and processing. This finding supports the future development of reference virus materials that could be used to standardize their HTS methodologies and validate their findings.”